PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09643
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 188aa    MW: 20671.6 Da    PI: 8.3379
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09643genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.6e-2073121355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+W+AeIrdp+    r  r +lg+f taeeAa+a+++a+ +++g
  PEQU_09643  73 YRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFETAEEAARAYDNAAIEFRG 121
                 9*******.**********82....48************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003807.3E-3672135IPR001471AP2/ERF domain
PROSITE profilePS5103224.88272129IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-2272130IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.3E-3272129IPR001471AP2/ERF domain
PfamPF008471.7E-1373121IPR001471AP2/ERF domain
CDDcd000182.07E-3173129No hitNo description
PRINTSPR003671.3E-117384IPR001471AP2/ERF domain
PRINTSPR003671.3E-1195111IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0034059Biological Processresponse to anoxia
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MVNALIHVIS GNPDAAAPPI SIPVGGDLPL CQLCGRGIEG CLGCHFFESS ATITAEVAGT  60
VVRKRRREKK NLYRGVRQRP WGKWAAEIRD PRRAVRKWLG TFETAEEAAR AYDNAAIEFR  120
GARAKLNFPF PDQILMGRRN EVGMDSTPAT GVARGSGEDM GGFWDGLSEL VKLDDVEQNG  180
NWMMIGHF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-2169130264ATERF1
3gcc_A1e-2169130264ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16266RKRRR
26268RKRRREK
36269RKRRREKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939424.12e-54PREDICTED: ethylene-responsive transcription factor ERF071-like
TrEMBLI1I7T62e-48I1I7T6_BRADI; Uncharacterized protein
STRINGBRADI3G38140.16e-48(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124236124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-25redox responsive transcription factor 1